2018-09-20 18:44:472025-03-13 23:18:35
locus
BSU34230
BSU_34230
geneLength
1164
1167
outlinks
bsu
BSU34230
BSU_34230
Gene
Coordinates
3,515,062 → 3,516,228
3,515,062 3,516,228
The protein
Protein family
degT/dnrJ/eryC1 family (according to Swiss-Prot)
DegT/DnrJ/EryC1 family (with [[protein|NtdA]] and [[protein|SpsC]], according to UniProt)
Biological materials
Mutant
MGNA-A064 (yvfE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/64 NBRP B. subtilis, Japan]
BKE34230 (Δ[[gene|epsN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34230 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAGTAGATTTTTTTATGCA, downstream forward: _UP4_TTCCATACTGTCGAGGTGAA
BKK34230 (Δ[[gene|epsN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34230 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAGTAGATTTTTTTATGCA, downstream forward: _UP4_TTCCATACTGTCGAGGTGAA
MGNA-A064 (yvfE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/64 NBRP B. subtilis, Japan]
BKE34230 ([[gene|epsN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34230 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAGTAGATTTTTTTATGCA, downstream forward: _UP4_TTCCATACTGTCGAGGTGAA
BKK34230 ([[gene|epsN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34230 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TAAGTAGATTTTTTTATGCA, downstream forward: _UP4_TTCCATACTGTCGAGGTGAA
Labs working on this gene/protein
[SW|Richard Losick], Harvard Univ., Cambridge, USA [http://www.mcb.harvard.edu/Losick/ homepage]
References
Research papers
The EAR [SW|RNA switch]
The protein
Structure
[PDB|1O61] (from Campylobacter jejuni, 46% identity) [SW|16021622]
labs
[SW|Richard Losick], Harvard Univ., Cambridge, USA [http://www.mcb.harvard.edu/Losick/ homepage]
References
The EAR [SW|RNA switch]